Gianluca Caprari pulled one back for Benevento in the 34th minute, before Hakimi got his first goal for his new club in the 42nd minute.
Bayern coach Hansi Flick added more quality with Leon Goretzka and Robert Lewandowski coming on the pitch but the goals were scored at the other end of the pitch as Ihlas Bebou set up for Kramaric, who kept his nerves to overcome Neuer from inside the box in the 77th minute.
Guangzhou Evergrande are chasing their ninth CSL title having dropped just eight points. But Fabio Cannavaro's side still have problems to solve on the defensive end, where ageing full-backs Li Xuepeng and Zhang Linpeng have raised questions whether they can stay healthy and consistent throughout the next stage.
The first defeat after a 32-game undefeated run in the league against Hoffenheim (4-1) has raised concerns that Bayern's strict saving policy might endanger the team's progress.
In the day's other two matches, Kunshan FC was held 1-1 by Sichuan Youbixuan, and Shaanxi Chang'an Athletic beat Jiangxi Liansheng 1-0. Enditem
"Mistakes are human, but I don't see how the umpire can miss that. She didn't see a double bounce," the 2017 French Open quarterfinalist added.
The Slovak will face Argentinian qualifier and world No. 131 Nadia Podoroska for a spot in the round of 16.
"We faced a team that attacked with many players and it was a different match compared to the one against Sampdoria. We wanted to keep the line tight, put pressure on the central players and exploit the one-on-one in attack, but we weren't always able to find solutions, after all we were playing against a solid team and we knew we would have difficulties," said Pirlo.
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Some fans and pundits fear Flick could soon be fed up with his side's strategy to avoid costly transfers and follow what many call a healthy spending policy.
Jepkosgei will return to the same course she shattered the world record in 2017 in half marathon and will face up against fellow countrywoman Joan Chelimo.